| Acyrthosiphon pisum (pea aphid) | Lingula anatina |
| Aedes aegypti (yellow fever mosquito) | Loa loa (eye worm) |
| Ailuropoda melanoleuca (giant panda) | Lottia gigantea (owl limpet) |
| Amphimedon queenslandica | Loxodonta africana (African savannah elephant) |
| Anas platyrhynchos (mallard ducks) | Lucilia cuprina (greenbottle fly) |
| Anolis carolinensis (green anole) | Macaca mulatta (rhesus monkeys) |
| Anopheles darlingi (American malaria mosquito) | Macropus eugenii (tammar wallaby) |
| Anopheles gambiae (African malaria mosquito) | Megaselia scalaris |
| Apis mellifera (honeybee) | Meleagris gallopavo (wild turkey) |
| Astyanax mexicanus (blind cave fish) | Melitaea cinxia (Glanville fritillary) |
| Atta cephalotes | Microcebus murinus (grey mouse lemur) |
| Belgica antarctica | Mnemiopsis leidyi (warty comb jelly) |
| Bombus impatiens (common eastern bumble bee) | Monodelphis domestica (gray short-tailed opossum) |
| Bombyx mori (silkworm) | Mus musculus (mouse) |
| Bos taurus (domestic cow) | Mustela putorius furo (ferret) |
| Brugia malayi (agent of lymphatic filariasis) | Myotis lucifugus (little brown bat) |
| Caenorhabditis brenneri | Nasonia vitripennis (jewel wasp) |
| Caenorhabditis briggsae | Nematostella vectensis (starlet sea anemone) |
| Caenorhabditis elegans (roundworm) | Nomascus leucogenys (northern white-cheeked gibbon) |
| Caenorhabditis japonica | Ochotona princeps (southern American pika) |
| Caenorhabditis remanei | Octopus bimaculoides |
| Callithrix jacchus (white-tufted-ear marmoset) | Onchocerca volvulus |
| Canis familiaris (Dog) | Oreochromis niloticus (Nile tilapia) |
| Capitella teleta | Ornithorhynchus anatinus (platypus) |
| Cavia porcellus (guinea pig) | Oryctolagus cuniculus (rabbits) |
| Chlorocebus sabaeus (green monkey) | Oryzias latipes (medaka) |
| Choloepus hoffmanni (Hoffmann's two-toed sloth) | Otolemur garnettii (small-eared galago) |
| Ciona intestinalis (yellow sea squirt) | Ovis aries (wild sheep) |
| Ciona savignyi (transparent tunicate) | Pan troglodytes (chimpanzee) |
| Crassostrea gigas (Pacific oyster) | Papio anubis (olive baboon) |
| Culex quinquefasciatus (southern house mosquito) | Pediculus humanus (human louse) |
| Danaus plexippus (monarch butterfly) | Pelodiscus sinensis (Chinese softshell turtle) |
| Danio rerio (zebrafish) | Petromyzon marinus (sea lamprey) |
| Daphnia pulex (common water flea) | Poecilia formosa (Amazon molly) |
| Dasypus novemcinctus (nine-banded armadillo) | Pongo abelii (orangutan) |
| Dendroctonus ponderosae (mountain pine beetle) | Pristionchus pacificus |
| Dipodomys ordii (Ord's kangaroo rat) | Procavia capensis (rock hyrax) |
| Drosophila ananassae | Pteropus vampyrus (large flying fox) |
| Drosophila erecta | Rattus norvegicus (rats) |
| Drosophila grimshawi | Rhodnius prolixus |
| Drosophila melanogaster (fruit fly) | Saccharomyces cerevisiae (yeast) |
| Drosophila mojavensis | Sarcophilus harrisii (Tasmanian devil) |
| Drosophila persimilis | Sarcoptes scabiei |
| Drosophila pseudoobscura | Schistosoma mansoni |
| Drosophila sechellia | Solenopsis invicta (red imported fire ant) |
| Drosophila simulans | Sorex araneus (European shrew) |
| Drosophila virilis | Stegodyphus mimosarum |
| Drosophila willistoni | Strigamia maritima |
| Drosophila yakuba | Strongylocentrotus purpuratus (purple urchin) |
| Echinops telfairi (small Madagascar hedgehog) | Strongyloides ratti |
| Equus caballus (horse) | Sus scrofa (wild boar) |
| Erinaceus europaeus (western European hedgehog) | Taeniopygia guttata (zebra finch) |
| Felis catus (domestic cat) | Takifugu rubripes (torafugu) |
| Ficedula albicollis (collared flycatcher) | Tarsius syrichta |
| Gadus morhua (Atlantic cod) | Tetranychus urticae (twospotted mite) |
| Gallus gallus (chickens) | Tetraodon nigroviridis (spotted green pufferfish) |
| Gasterosteus aculeatus (three-spined stickleback) | Thelohanellus kitauei |
| Gorilla gorilla (western gorilla) | Tribolium castaneum (rust-red flour beetle) |
| Heliconius melpomene (postman butterfly) | Trichinella spiralis |
| Helobdella robusta | Trichoplax adhaerens |
| Homo sapiens (human) | Tupaia belangeri (northern tree shrew) |
| Ictidomys tridecemlineatus (thirteen-lined ground squirrel) | Tursiops truncatus (bottlenosed dolphin) |
| Ixodes scapularis (shoulder tick) | Vicugna pacos (alpaca) |
| Latimeria chalumnae (coelacanth) | Xenopus tropicalis (western clawed frog) |
| Lepeophtheirus salmonis (salmon louse) | Xiphophorus maculatus (southern platyfish) |
| Lepisosteus oculatus (spotted gar) | Zootermopsis nevadensis |
| Ashbya gossypii | Magnaporthe oryzae (rice blast fungus) |
| Aspergillus clavatus | Magnaporthe poae |
| Aspergillus flavus | Melampsora laricipopulina |
| Aspergillus fumigatus | Microbotryum violaceum |
| Aspergillus nidulans | Neosartorya fischeri |
| Aspergillus niger | Neurospora crassa |
| Aspergillus oryzae | Phaeosphaeria nodorum |
| Aspergillus terreus | Puccinia graminis |
| Blumeria graminis (grass mildew) | Puccinia triticina (wheat leaf rust) |
| Botrytis cinerea | Pyrenophora teres (barley net-spot blotch disease agent) |
| Colletotrichum gloeosporioides | Pyrenophora triticirepentis |
| Colletotrichum graminicola | Saccharomyces cerevisiae (yeast) |
| Colletotrichum higginsianum | Schizosaccharomyces cryophilus |
| Colletotrichum orbiculare | Schizosaccharomyces japonicus |
| Cryptococcus neoformans | Schizosaccharomyces octosporus |
| Dothistroma septosporum | Schizosaccharomyces pombe (fission yeast) |
| Fusarium fujikuroi | Sclerotinia sclerotiorum |
| Fusarium graminearum | Sporisorium reilianum |
| Fusarium oxysporum | Trichoderma reesei |
| Fusarium pseudograminearum | Trichoderma virens |
| Fusarium solani | Tuber melanosporum (black truffle) |
| Fusarium verticillioides | Ustilago maydis |
| Gaeumannomyces graminis | Verticillium dahliae |
| Komagataella pastoris | Yarrowia lipolytica |
| Leptosphaeria maculans (blackleg of rapeseed fungus) | Zymoseptoria tritici |
